Merge branch 'master' into 'master'
Add the bam_to_scidx tool. See merge request !13
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- tools/bam_to_scidx/.shed.yml 13 additions, 0 deletionstools/bam_to_scidx/.shed.yml
- tools/bam_to_scidx/BAMtoIDX.jar 0 additions, 0 deletionstools/bam_to_scidx/BAMtoIDX.jar
- tools/bam_to_scidx/bam_to_scidx.py 69 additions, 0 deletionstools/bam_to_scidx/bam_to_scidx.py
- tools/bam_to_scidx/bam_to_scidx.xml 50 additions, 0 deletionstools/bam_to_scidx/bam_to_scidx.xml
- tools/bam_to_scidx/test-data/input.bam 0 additions, 0 deletionstools/bam_to_scidx/test-data/input.bam
- tools/bam_to_scidx/test-data/output.scidx 21 additions, 0 deletionstools/bam_to_scidx/test-data/output.scidx
- tools/cwpair2/cwpair2.py 0 additions, 2 deletionstools/cwpair2/cwpair2.py
- tools/cwpair2/cwpair2.xml 0 additions, 7 deletionstools/cwpair2/cwpair2.xml
- tools/cwpair2/cwpair2_util.py 3 additions, 19 deletionstools/cwpair2/cwpair2_util.py
- tools/genetrack/genetrack_util.py 5 additions, 52 deletionstools/genetrack/genetrack_util.py
tools/bam_to_scidx/.shed.yml
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tools/bam_to_scidx/BAMtoIDX.jar
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tools/bam_to_scidx/bam_to_scidx.py
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tools/bam_to_scidx/bam_to_scidx.xml
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tools/bam_to_scidx/test-data/input.bam
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File added
tools/bam_to_scidx/test-data/output.scidx
0 → 100644
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